Human SNP ID | rs4936891 |
---|---|
Human chromosome | chr11 |
Human SNP position | 124049938 |
Pig chromosome | chr9 |
Pig SNP position | 56476110 |
PubMed ID | 22633400 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22633400 |
Study | Genome-wide association study identifies candidate genes for male fertility traits in humans. |
Disease/Trait | Male fertility |
Initial sample | 269 Hutterite males |
Replication sample | NA |
Region | 11q24.2 |
Chromosome id | chr11 |
Chromosome position | 124049938 |
Reported gene | OR10G7 |
Mapped gene | OR10G7 - LOC105369545 |
Upstream gene id | 390265 |
Downstream gene id | 105369545 |
SNP gene ids | |
Upstream gene distance | 10937 |
Downstream gene distance | 32420 |
SNP risk allele | rs4936891-C |
SNPs | rs4936891 |
Merged | 0 |
SNP id current | 4936891 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.36 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (Birth rate, additive) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [248210] |
CNV | N |
Mapped trait | birth rate, male fertility |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004804, http://www.ebi.ac.uk/efo/EFO_0004803 |
Study accession | GCST001540 |