Human SNP ID | rs4925189 |
---|---|
Human chromosome | chr20 |
Human SNP position | 61371988 |
Pig chromosome | chr17 |
Pig SNP position | 68560906 |
PubMed ID | 20932310 |
---|---|
Journal | BMC Neurol |
Link | www.ncbi.nlm.nih.gov/pubmed/20932310 |
Study | Genome-wide association reveals genetic effects on human Aβ42 and τ protein levels in cerebrospinal fluids: a case control study. |
Disease/Trait | Cerebrospinal T-tau levels |
Initial sample | 172 European ancestry Alzheimer__s disease cases, 109 European ancestry mild cognitive impairment cases, 109 European ancestry controls |
Replication sample | NA |
Region | 20q13.33 |
Chromosome id | chr20 |
Chromosome position | 61371988 |
Reported gene | CDH4 |
Mapped gene | CDH4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1002 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4925189-G |
SNPs | rs4925189 |
Merged | 0 |
SNP id current | 4925189 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | (AD) |
Or beta | |
%95 Ci | |
Platform | Illumina [498205] |
CNV | N |
Mapped trait | t-tau measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004760 |
Study accession | GCST000826 |