Human SNP ID | rs4905994 |
---|---|
Human chromosome | chr14 |
Human SNP position | 100687735 |
Pig chromosome | chr7 |
Pig SNP position | 132257357 |
PubMed ID | 25886283 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25886283 |
Study | Genome-wide association study of serum minerals levels in children of different ethnic background. |
Disease/Trait | Magnesium levels |
Initial sample | 2,317 European ancestry children, 1,283 African-American ancestry children |
Replication sample | NA |
Region | 14q32.2 |
Chromosome id | chr14 |
Chromosome position | 100687735 |
Reported gene | NR |
Mapped gene | LOC105370668 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105370668 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4905994-T |
SNPs | rs4905994 |
Merged | 0 |
SNP id current | 4905994 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.0234 |
%95 Ci | [NR] mg/dl decrease |
Platform | Illumina [up to 509150] |
CNV | N |
Mapped trait | magnesium measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004845 |
Study accession | GCST002860 |
PubMed ID | 25886283 |
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25886283 |
Study | Genome-wide association study of serum minerals levels in children of different ethnic background. |
Disease/Trait | Magnesium levels |
Initial sample | 2,317 European ancestry children, 1,283 African-American ancestry children |
Replication sample | NA |
Region | 14q32.2 |
Chromosome id | chr14 |
Chromosome position | 100687735 |
Reported gene | NR |
Mapped gene | LOC105370668 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105370668 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4905994-T |
SNPs | rs4905994 |
Merged | 0 |
SNP id current | 4905994 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (EA) |
Or beta | 0.02871 |
%95 Ci | (-0.04119--0.01623) mg/dl decrease |
Platform | Illumina [up to 509150] |
CNV | N |
Mapped trait | magnesium measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004845 |
Study accession | GCST002860 |