Human SNP ID | rs4902642 |
---|---|
Human chromosome | chr14 |
Human SNP position | 68743482 |
Pig chromosome | chr7 |
Pig SNP position | 98754743 |
PubMed ID | 21102463 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21102463 |
Study | Genome-wide meta-analysis increases to 71 the number of confirmed Crohn__s disease susceptibility loci. |
Disease/Trait | Crohn__s disease |
Initial sample | 6,333 European ancestry cases, 15,056 European ancestry controls |
Replication sample | 15,694 European ancestry cases, 14,026 European ancestry controls, 414 European ancestry trios |
Region | 14q24.1 |
Chromosome id | chr14 |
Chromosome position | 68743482 |
Reported gene | ZFP36L1 |
Mapped gene | RPL12P7 - ZFP36L1 |
Upstream gene id | 326275 |
Downstream gene id | 677 |
SNP gene ids | |
Upstream gene distance | 49856 |
Downstream gene distance | 44173 |
SNP risk allele | rs4902642-G |
SNPs | rs4902642 |
Merged | 0 |
SNP id current | 4902642 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.584 |
P value | 0.0000000002 |
Pvalue mlog | 9.69897000433601 |
P value text | |
Or beta | 1.07 |
%95 Ci | [1.11-1.04] |
Platform | Affymetrix, Illumina [953241] (imputed) |
CNV | N |
Mapped trait | Crohn__s disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000384 |
Study accession | GCST000879 |