Human SNP ID | rs4902562 |
---|---|
Human chromosome | chr14 |
Human SNP position | 68264741 |
Pig chromosome | chr7 |
Pig SNP position | 98295131 |
PubMed ID | 26502338 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26502338 |
Study | Genetic association analyses implicate aberrant regulation of innate and adaptive immunity genes in the pathogenesis of systemic lupus erythematosus. |
Disease/Trait | Systemic lupus erythematosus |
Initial sample | 5,201 European ancestry cases, 9,066 European ancestry controls |
Replication sample | 2,018 European ancestry cases, 6,925 European ancestry controls |
Region | 14q24.1 |
Chromosome id | chr14 |
Chromosome position | 68264741 |
Reported gene | RAD51B |
Mapped gene | RAD51B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5890 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4902562-A |
SNPs | rs4902562 |
Merged | |
SNP id current | 4902562 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.0000000006 |
Pvalue mlog | 9.22184874961635 |
P value text | |
Or beta | 1.14 |
%95 Ci | [1.09鈥?.19] |
Platform | Illumina [644674] |
CNV | N |
Mapped trait | systemic lupus erythematosus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002690 |
Study accession | GCST003155 |
PubMed ID | 26502338 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26502338 |
Study | Genetic association analyses implicate aberrant regulation of innate and adaptive immunity genes in the pathogenesis of systemic lupus erythematosus. |
Disease/Trait | Systemic lupus erythematosus |
Initial sample | 5,201 European ancestry cases, 9,066 European ancestry controls |
Replication sample | NA |
Region | 14q24.1 |
Chromosome id | chr14 |
Chromosome position | 68264741 |
Reported gene | RAD51B |
Mapped gene | RAD51B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5890 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4902562-A |
SNPs | rs4902562 |
Merged | |
SNP id current | 4902562 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.13 |
%95 Ci | [NR] |
Platform | Illumina [> 644674] (imputed) |
CNV | N |
Mapped trait | systemic lupus erythematosus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002690 |
Study accession | GCST003156 |