SNP Detail For rs4894707
1.Mapping Information
Human SNP ID rs4894707
Human chromosome chr3
Human SNP position 171651986
Pig chromosome chr13
Pig SNP position 119193619
2.Annotation Information
PubMed ID26528553
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26528553
StudyGenome-Wide Association Studies of the Human Gut Microbiota.
Disease/TraitGut microbiome composition (summer and winter)
Initial sample127 Hutterite individuals
Replication sampleNA
Region3q26.31
Chromosome idchr3
Chromosome position171651986
Reported geneNR
Mapped genePLD1
Upstream gene id
Downstream gene id
SNP gene ids5337
Upstream gene distance
Downstream gene distance
SNP risk allelers4894707-?
SNPsrs4894707
Merged0
SNP id current4894707
Contextintron_variant
Intergenic0
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text(genus_Akkermansia)
Or beta0.7636091
%95 Ci[0.45-1.07] unit increase
PlatformAffymetrix [212153]
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003222