Human SNP ID | rs4894707 |
---|---|
Human chromosome | chr3 |
Human SNP position | 171651986 |
Pig chromosome | chr13 |
Pig SNP position | 119193619 |
PubMed ID | 26528553 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26528553 |
Study | Genome-Wide Association Studies of the Human Gut Microbiota. |
Disease/Trait | Gut microbiome composition (summer and winter) |
Initial sample | 127 Hutterite individuals |
Replication sample | NA |
Region | 3q26.31 |
Chromosome id | chr3 |
Chromosome position | 171651986 |
Reported gene | NR |
Mapped gene | PLD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5337 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4894707-? |
SNPs | rs4894707 |
Merged | 0 |
SNP id current | 4894707 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (genus_Akkermansia) |
Or beta | 0.7636091 |
%95 Ci | [0.45-1.07] unit increase |
Platform | Affymetrix [212153] |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003222 |