SNP Detail For rs4888966
1.Mapping Information
Human SNP ID rs4888966
Human chromosome chr16
Human SNP position 79397956
Pig chromosome chr6
Pig SNP position 8821955
2.Annotation Information
PubMed ID23259602
JournalBMC Oral Health
Linkwww.ncbi.nlm.nih.gov/pubmed/23259602
StudyGenome-wide association scan of dental caries in the permanent dentition.
Disease/TraitDental caries
Initial sample1,483 European ancestry comparatively younger individuals, 5,960 European ancestry comparatively older individuals
Replication sampleNA
Region16q23.2
Chromosome idchr16
Chromosome position79397956
Reported geneLOC729251
Mapped geneMAF
Upstream gene id
Downstream gene id
SNP gene ids4094
Upstream gene distance
Downstream gene distance
SNP risk allelers4888966-?
SNPsrs4888966
Merged0
SNP id current4888966
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(Comparatively Younger)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 1400000] (imputed)
CNVN
Mapped traitdental caries
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003819
Study accessionGCST001786