SNP Detail For rs4883201
1.Mapping Information
Human SNP ID rs4883201
Human chromosome chr12
Human SNP position 8929985
Pig chromosome chr5
Pig SNP position 65369339
2.Annotation Information
PubMed ID24097068
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24097068
StudyDiscovery and refinement of loci associated with lipid levels.
Disease/TraitCholesterol, total
Initial sample94,595 European ancestry individuals
Replication sample93,982 European ancestry individuals
Region12p13.31
Chromosome idchr12
Chromosome position8929985
Reported geneA2ML1, PHC1
Mapped genePHC1
Upstream gene id
Downstream gene id
SNP gene ids1911
Upstream gene distance
Downstream gene distance
SNP risk allelers4883201-G
SNPsrs4883201
Merged0
SNP id current4883201
Contextintron_variant
Intergenic0
Allele frequency0.12
P value0.000000002
Pvalue mlog8.69897000433601
P value text
Or beta0.035
%95 Ci[NR] unit decrease
PlatformNR [NR] (imputed)
CNVN
Mapped traittotal cholesterol measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004574
Study accessionGCST002221