Human SNP ID | rs4883201 |
---|---|
Human chromosome | chr12 |
Human SNP position | 8929985 |
Pig chromosome | chr5 |
Pig SNP position | 65369339 |
PubMed ID | 24097068 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24097068 |
Study | Discovery and refinement of loci associated with lipid levels. |
Disease/Trait | Cholesterol, total |
Initial sample | 94,595 European ancestry individuals |
Replication sample | 93,982 European ancestry individuals |
Region | 12p13.31 |
Chromosome id | chr12 |
Chromosome position | 8929985 |
Reported gene | A2ML1, PHC1 |
Mapped gene | PHC1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1911 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4883201-G |
SNPs | rs4883201 |
Merged | 0 |
SNP id current | 4883201 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.12 |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | 0.035 |
%95 Ci | [NR] unit decrease |
Platform | NR [NR] (imputed) |
CNV | N |
Mapped trait | total cholesterol measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004574 |
Study accession | GCST002221 |