Human SNP ID | rs4879628 |
---|---|
Human chromosome | chr9 |
Human SNP position | 32888522 |
Pig chromosome | chr10 |
Pig SNP position | 37760750 |
PubMed ID | 26580837 |
---|---|
Journal | Biomark Med |
Link | www.ncbi.nlm.nih.gov/pubmed/26580837 |
Study | A genome-wide association study on amyotrophic lateral sclerosis in the Taiwanese Han population. |
Disease/Trait | Amyotrophic lateral sclerosis |
Initial sample | 94 Taiwanese Han ancestry cases, 376 Taiwanese Han ancestry controls |
Replication sample | NA |
Region | 9p21.1 |
Chromosome id | chr9 |
Chromosome position | 32888522 |
Reported gene | intergenic |
Mapped gene | TMEM215 - ASS1P12 |
Upstream gene id | 401498 |
Downstream gene id | 392302 |
SNP gene ids | |
Upstream gene distance | 99321 |
Downstream gene distance | 57372 |
SNP risk allele | rs4879628-T |
SNPs | rs4879628 |
Merged | 0 |
SNP id current | 4879628 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.055 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 3.293 |
%95 Ci | [NR] |
Platform | Affymetrix [633420] |
CNV | N |
Mapped trait | amyotrophic lateral sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000253 |
Study accession | GCST003175 |