SNP Detail For rs4879628
1.Mapping Information
Human SNP ID rs4879628
Human chromosome chr9
Human SNP position 32888522
Pig chromosome chr10
Pig SNP position 37760750
2.Annotation Information
PubMed ID26580837
JournalBiomark Med
Linkwww.ncbi.nlm.nih.gov/pubmed/26580837
StudyA genome-wide association study on amyotrophic lateral sclerosis in the Taiwanese Han population.
Disease/TraitAmyotrophic lateral sclerosis
Initial sample94 Taiwanese Han ancestry cases, 376 Taiwanese Han ancestry controls
Replication sampleNA
Region9p21.1
Chromosome idchr9
Chromosome position32888522
Reported geneintergenic
Mapped geneTMEM215 - ASS1P12
Upstream gene id401498
Downstream gene id392302
SNP gene ids
Upstream gene distance99321
Downstream gene distance57372
SNP risk allelers4879628-T
SNPsrs4879628
Merged0
SNP id current4879628
Contextintergenic_variant
Intergenic1
Allele frequency0.055
P value0.000001
Pvalue mlog6
P value text
Or beta3.293
%95 Ci[NR]
PlatformAffymetrix [633420]
CNVN
Mapped traitamyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000253
Study accessionGCST003175