SNP Detail For rs4878497
1.Mapping Information
Human SNP ID rs4878497
Human chromosome chr9
Human SNP position 32432976
Pig chromosome chr10
Pig SNP position 38210858
2.Annotation Information
PubMed ID25574825
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25574825
StudyGenome-wide Comparative Analysis of Atopic Dermatitis and Psoriasis Gives Insight into Opposing Genetic Mechanisms.
Disease/TraitInflammatory skin disease
Initial sample2,079 European ancestry atopic dermatitis cases, 4,212 European ancestry psoriasis cases, 11,899 European ancestry controls
Replication sampleNA
Region9p21.1
Chromosome idchr9
Chromosome position32432976
Reported geneACO1
Mapped geneACO1
Upstream gene id
Downstream gene id
SNP gene ids48
Upstream gene distance
Downstream gene distance
SNP risk allelers4878497-?
SNPsrs4878497
Merged0
SNP id current4878497
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000000004
Pvalue mlog8.39794000867203
P value text(Psoriasis)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 5200000]
CNVN
Mapped traitpsoriasis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000676
Study accessionGCST002740