Human SNP ID | rs4875102 |
---|---|
Human chromosome | chr8 |
Human SNP position | 4427170 |
Pig chromosome | chr15 |
Pig SNP position | 40743038 |
PubMed ID | 22993228 |
---|---|
Journal | Ann Rheum Dis |
Link | www.ncbi.nlm.nih.gov/pubmed/22993228 |
Study | Novel genetic variants associated with lumbar disc degeneration in northern Europeans: a meta-analysis of 4600 subjects. |
Disease/Trait | Disc degeneration (lumbar) |
Initial sample | 4,683 European ancestry individuals |
Replication sample | NA |
Region | 8p23.2 |
Chromosome id | chr8 |
Chromosome position | 4427170 |
Reported gene | intergenic |
Mapped gene | CSMD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 64478 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4875102-A |
SNPs | rs4875102 |
Merged | 0 |
SNP id current | 4875102 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.26 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 0.12 |
%95 Ci | [0.073-0.167] unit decrease |
Platform | Affymetrix, Illumina [2552511] (imputed) |
CNV | N |
Mapped trait | lumbar disc degeneration |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004994 |
Study accession | GCST001687 |