SNP Detail For rs4875102
1.Mapping Information
Human SNP ID rs4875102
Human chromosome chr8
Human SNP position 4427170
Pig chromosome chr15
Pig SNP position 40743038
2.Annotation Information
PubMed ID22993228
JournalAnn Rheum Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/22993228
StudyNovel genetic variants associated with lumbar disc degeneration in northern Europeans: a meta-analysis of 4600 subjects.
Disease/TraitDisc degeneration (lumbar)
Initial sample4,683 European ancestry individuals
Replication sampleNA
Region8p23.2
Chromosome idchr8
Chromosome position4427170
Reported geneintergenic
Mapped geneCSMD1
Upstream gene id
Downstream gene id
SNP gene ids64478
Upstream gene distance
Downstream gene distance
SNP risk allelers4875102-A
SNPsrs4875102
Merged0
SNP id current4875102
Contextintron_variant
Intergenic0
Allele frequency0.26
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta0.12
%95 Ci[0.073-0.167] unit decrease
PlatformAffymetrix, Illumina [2552511] (imputed)
CNVN
Mapped traitlumbar disc degeneration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004994
Study accessionGCST001687