SNP Detail For rs4872511
1.Mapping Information
Human SNP ID rs4872511
Human chromosome chr8
Human SNP position 22543476
Pig chromosome chr14
Pig SNP position 7276686
2.Annotation Information
PubMed ID20205591
JournalJ Infect Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/20205591
StudyHost determinants of HIV-1 control in African Americans.
Disease/TraitHIV-1 viral setpoint
Initial sample515 African American cases
Replication sampleNA
Region8p21.3
Chromosome idchr8
Chromosome position22543476
Reported genePPP3CC
Mapped genePPP3CC - SORBS3
Upstream gene id5533
Downstream gene id10174
SNP gene ids
Upstream gene distance2332
Downstream gene distance1514
SNP risk allelers4872511-?
SNPsrs4872511
Merged0
SNP id current4872511
Contextnon_coding_transcript_exon_variant
Intergenic1
Allele frequency0.01
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta
%95 Ci
PlatformIllumina [1212217]
CNVN
Mapped traitHIV-1 infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000180
Study accessionGCST000656