Human SNP ID | rs4872511 |
---|---|
Human chromosome | chr8 |
Human SNP position | 22543476 |
Pig chromosome | chr14 |
Pig SNP position | 7276686 |
PubMed ID | 20205591 |
---|---|
Journal | J Infect Dis |
Link | www.ncbi.nlm.nih.gov/pubmed/20205591 |
Study | Host determinants of HIV-1 control in African Americans. |
Disease/Trait | HIV-1 viral setpoint |
Initial sample | 515 African American cases |
Replication sample | NA |
Region | 8p21.3 |
Chromosome id | chr8 |
Chromosome position | 22543476 |
Reported gene | PPP3CC |
Mapped gene | PPP3CC - SORBS3 |
Upstream gene id | 5533 |
Downstream gene id | 10174 |
SNP gene ids | |
Upstream gene distance | 2332 |
Downstream gene distance | 1514 |
SNP risk allele | rs4872511-? |
SNPs | rs4872511 |
Merged | 0 |
SNP id current | 4872511 |
Context | non_coding_transcript_exon_variant |
Intergenic | 1 |
Allele frequency | 0.01 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [1212217] |
CNV | N |
Mapped trait | HIV-1 infection |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000180 |
Study accession | GCST000656 |