SNP Detail For rs4871750
1.Mapping Information
Human SNP ID rs4871750
Human chromosome chr8
Human SNP position 126889758
Pig chromosome chr4
Pig SNP position 13520294
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region8q24.21
Chromosome idchr8
Chromosome position126889758
Reported geneFAM84B
Mapped geneLOC105375753 - PCAT1
Upstream gene id105375753
Downstream gene id100750225
SNP gene ids
Upstream gene distance42771
Downstream gene distance123396
SNP risk allelers4871750-A
SNPsrs4871750
Merged0
SNP id current4871750
Contextintron_variant
Intergenic1
Allele frequency0.383
P value0.0000004
Pvalue mlog6.39794000867203
P value text(Bone mineral content )
Or beta0.04
%95 Ci[NR] kg increase
PlatformIllumina [899892]
CNVN
Mapped traitbone density
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003923
Study accessionGCST001762