Human SNP ID | rs4871750 |
---|---|
Human chromosome | chr8 |
Human SNP position | 126889758 |
Pig chromosome | chr4 |
Pig SNP position | 13520294 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 8q24.21 |
Chromosome id | chr8 |
Chromosome position | 126889758 |
Reported gene | FAM84B |
Mapped gene | LOC105375753 - PCAT1 |
Upstream gene id | 105375753 |
Downstream gene id | 100750225 |
SNP gene ids | |
Upstream gene distance | 42771 |
Downstream gene distance | 123396 |
SNP risk allele | rs4871750-A |
SNPs | rs4871750 |
Merged | 0 |
SNP id current | 4871750 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.383 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | (Bone mineral content ) |
Or beta | 0.04 |
%95 Ci | [NR] kg increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | bone density |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003923 |
Study accession | GCST001762 |