SNP Detail For rs4870684
1.Mapping Information
Human SNP ID rs4870684
Human chromosome chr7
Human SNP position 57639445
Pig chromosome chr6
Pig SNP position 145489249
2.Annotation Information
PubMed ID20889312
JournalSchizophr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20889312
StudyA genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
Disease/TraitBipolar disorder and schizophrenia
Initial sample651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls
Replication sampleNA
Region7p11.2
Chromosome idchr7
Chromosome position57639445
Reported geneNR
Mapped geneLOC105375301 - LOC105375302
Upstream gene id105375301
Downstream gene id105375302
SNP gene ids
Upstream gene distance89510
Downstream gene distance130764
SNP risk allelers4870684-?
SNPsrs4870684
Merged0
SNP id current4870684
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.2718
%95 Ci[NR]
PlatformAffymetrix [722112]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000821