SNP Detail For rs4868644
1.Mapping Information
Human SNP ID rs4868644
Human chromosome chr5
Human SNP position 176520050
Pig chromosome chr2
Pig SNP position 82998679
2.Annotation Information
PubMed ID23509962
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23509962
StudyA genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
Disease/TraitVenous thromboembolism (SNP x SNP interaction)
Initial sample411 European ancestry cases, 1,228 European ancestry controls
Replication sample1,542 European ancestry cases, 1,110 European ancestry controls
Region3p22.3 x 5q35.2
Chromosome idchr3 x 5
Chromosome position32900360 x 176520050
Reported geneNR x NR
Mapped geneTRIM71 - CCR4 x FAF2 - RNF44
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers7648704-G x rs4868644-T
SNPsrs7648704 x rs4868644
Merged0
SNP id current
Contextdownstream_gene_variant x intergenic_variant
Intergenic
Allele frequency
P value0.000000001
Pvalue mlog9
P value text
Or beta1.56
%95 Ci[NR]
PlatformIllumina [291872]
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST001913