SNP Detail For rs4859682
1.Mapping Information
Human SNP ID rs4859682
Human chromosome chr4
Human SNP position 76489165
Pig chromosome chr8
Pig SNP position 76347217
2.Annotation Information
PubMed ID23535967
JournalJ Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23535967
StudyUsing multiple measures for quantitative trait association analyses: application to estimated glomerular filtration rate.
Disease/TraitGlomerular filtration rate
Initial sample9,049 European ancestry individuals
Replication sample
Region4q21.1
Chromosome idchr4
Chromosome position76489165
Reported geneSHROOM3
Mapped geneSHROOM3
Upstream gene id
Downstream gene id
SNP gene ids57619
Upstream gene distance
Downstream gene distance
SNP risk allelers4859682-A
SNPsrs4859682
Merged0
SNP id current4859682
Contextintron_variant
Intergenic0
Allele frequency0.45
P value0.000000002
Pvalue mlog8.69897000433601
P value text(6-measure Model)
Or beta0.96
%95 Ci[0.65-1.27] unit decrease
PlatformAffymetrix [> 2500000] (imputed)
CNVN
Mapped traitglomerular filtration rate
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005208
Study accessionGCST001923