Human SNP ID | rs4859682 |
---|---|
Human chromosome | chr4 |
Human SNP position | 76489165 |
Pig chromosome | chr8 |
Pig SNP position | 76347217 |
PubMed ID | 23535967 |
---|---|
Journal | J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23535967 |
Study | Using multiple measures for quantitative trait association analyses: application to estimated glomerular filtration rate. |
Disease/Trait | Glomerular filtration rate |
Initial sample | 9,049 European ancestry individuals |
Replication sample | |
Region | 4q21.1 |
Chromosome id | chr4 |
Chromosome position | 76489165 |
Reported gene | SHROOM3 |
Mapped gene | SHROOM3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 57619 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4859682-A |
SNPs | rs4859682 |
Merged | 0 |
SNP id current | 4859682 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.45 |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | (6-measure Model) |
Or beta | 0.96 |
%95 Ci | [0.65-1.27] unit decrease |
Platform | Affymetrix [> 2500000] (imputed) |
CNV | N |
Mapped trait | glomerular filtration rate |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005208 |
Study accession | GCST001923 |