SNP Detail For rs4855695
1.Mapping Information
Human SNP ID rs4855695
Human chromosome chr3
Human SNP position 109132637
Pig chromosome chr13
Pig SNP position 159467130
2.Annotation Information
PubMed ID24743840
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24743840
StudyGenome-wide diet-gene interaction analyses for risk of colorectal cancer.
Disease/TraitColorectal cancer (diet interaction)
Initial sample9,287 European ancestry cases, 9,117 European ancestry controls
Replication sampleNA
Region3q13.13
Chromosome idchr3
Chromosome position109132637
Reported geneMORC1, FLJ22763
Mapped geneMORC1 - FLJ22763
Upstream gene id27136
Downstream gene id401081
SNP gene ids
Upstream gene distance14491
Downstream gene distance4077
SNP risk allelers4855695-?
SNPsrs4855695
Merged0
SNP id current4855695
Contextintron_variant
Intergenic1
Allele frequency0.51-0.58
P value0.000002
Pvalue mlog5.69897000433601
P value text(Fiber)
Or beta1.14
%95 Ci[1.08-1.20]
PlatformAffymetrix, Illumina [> 2700000] (imputed)
CNVN
Mapped traitcolorectal cancer
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005842
Study accessionGCST002415