SNP Detail For rs4849121
1.Mapping Information
Human SNP ID rs4849121
Human chromosome chr2
Human SNP position 110842129
Pig chromosome chr3
Pig SNP position 47413885
2.Annotation Information
PubMed ID22197929
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22197929
StudyA genome-wide association study in Han Chinese identifies multiple susceptibility loci for IgA nephropathy.
Disease/TraitIgA nephropathy
Initial sample1,434 Han Chinese ancestry cases, 4,270 Han Chinese ancestry controls
Replication sample2,703 Han Chinese ancestry cases, 3,464 Han Chinese ancestry controls
Region2q13
Chromosome idchr2
Chromosome position110842129
Reported geneACOXL
Mapped geneACOXL
Upstream gene id
Downstream gene id
SNP gene ids55289
Upstream gene distance
Downstream gene distance
SNP risk allelers4849121-G
SNPsrs4849121
Merged0
SNP id current4849121
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta1.15
%95 Ci[1.09-1.22]
PlatformIllumina [444882]
CNVN
Mapped traitIGA glomerulonephritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004194
Study accessionGCST001364