SNP Detail For rs4845812
1.Mapping Information
Human SNP ID rs4845812
Human chromosome chr1
Human SNP position 5647756
Pig chromosome chr6
Pig SNP position 61535571
2.Annotation Information
PubMed ID23319000
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23319000
StudyGenome-wide association study of monoamine metabolite levels in human cerebrospinal fluid.
Disease/TraitMetabolite levels (MHPG)
Initial sampleup to 398 European ancestry individuals
Replication sampleNA
Region1p36.31
Chromosome idchr1
Chromosome position5647756
Reported geneAK125078
Mapped geneMIR4417 - LOC100287877
Upstream gene id100616489
Downstream gene id100287877
SNP gene ids
Upstream gene distance83613
Downstream gene distance57812
SNP risk allelers4845812-T
SNPsrs4845812
Merged0
SNP id current4845812
Contextintron_variant
Intergenic1
Allele frequency
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.2917
%95 Ciunit decrease
PlatformIllumina [5767231] (imputed)
CNVN
Mapped traitMHPG measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005133
Study accessionGCST001822