SNP Detail For rs4839516
1.Mapping Information
Human SNP ID rs4839516
Human chromosome chr1
Human SNP position 116197828
Pig chromosome chr4
Pig SNP position 114640742
2.Annotation Information
PubMed ID23738518
JournalGenes Brain Behav
Linkwww.ncbi.nlm.nih.gov/pubmed/23738518
StudyA genome-wide association study for reading and language abilities in two population cohorts.
Disease/TraitWord reading
Initial sample6,649 European ancestry children and adolescents
Replication sample
Region1p13.1
Chromosome idchr1
Chromosome position116197828
Reported geneintergenic
Mapped geneMAB21L3 - LOC105378919
Upstream gene id126868
Downstream gene id105378919
SNP gene ids
Upstream gene distance62588
Downstream gene distance43136
SNP risk allelers4839516-A
SNPsrs4839516
Merged0
SNP id current4839516
Contextintergenic_variant
Intergenic1
Allele frequency0.31
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta0.079
%95 Ci[0.05-0.108] unit increase
PlatformIllumina [~ 2400000] (imputed)
CNVN
Mapped traitword reading
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005300
Study accessionGCST002060