SNP Detail For rs4838605
1.Mapping Information
Human SNP ID rs4838605
Human chromosome chr10
Human SNP position 48491914
Pig chromosome chr14
Pig SNP position 96991724
2.Annotation Information
PubMed ID21310492
JournalOphthalmology
Linkwww.ncbi.nlm.nih.gov/pubmed/21310492
StudyGenome-wide association study of diabetic retinopathy in a Taiwanese population.
Disease/TraitDiabetic retinopathy
Initial sample174 Han Chinese ancestry Type 2 diabetes cases, 575 Han Chinese ancestry Type 2 diabetes controls, 100 Han Chinese ancestry non-diabetic controls
Replication sampleNA
Region10q11.22
Chromosome idchr10
Chromosome position48491914
Reported geneARHGAP22
Mapped geneARHGAP22
Upstream gene id
Downstream gene id
SNP gene ids58504
Upstream gene distance
Downstream gene distance
SNP risk allelers4838605-C
SNPsrs4838605
Merged0
SNP id current4838605
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000000002
Pvalue mlog8.69897000433601
P value text
Or beta
%95 Ci
PlatformIllumina [~ 550000]
CNVN
Mapped traitdiabetic retinopathy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003770
Study accessionGCST000966