Human SNP ID | rs4838605 |
---|---|
Human chromosome | chr10 |
Human SNP position | 48491914 |
Pig chromosome | chr14 |
Pig SNP position | 96991724 |
PubMed ID | 21310492 |
---|---|
Journal | Ophthalmology |
Link | www.ncbi.nlm.nih.gov/pubmed/21310492 |
Study | Genome-wide association study of diabetic retinopathy in a Taiwanese population. |
Disease/Trait | Diabetic retinopathy |
Initial sample | 174 Han Chinese ancestry Type 2 diabetes cases, 575 Han Chinese ancestry Type 2 diabetes controls, 100 Han Chinese ancestry non-diabetic controls |
Replication sample | NA |
Region | 10q11.22 |
Chromosome id | chr10 |
Chromosome position | 48491914 |
Reported gene | ARHGAP22 |
Mapped gene | ARHGAP22 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 58504 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4838605-C |
SNPs | rs4838605 |
Merged | 0 |
SNP id current | 4838605 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 550000] |
CNV | N |
Mapped trait | diabetic retinopathy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003770 |
Study accession | GCST000966 |