Human SNP ID | rs4811340 |
---|---|
Human chromosome | chr20 |
Human SNP position | 52393218 |
Pig chromosome | chr17 |
Pig SNP position | 60145535 |
PubMed ID | 24586183 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24586183 |
Study | Identification of novel genetic Loci associated with thyroid peroxidase antibodies and clinical thyroid disease. |
Disease/Trait | Thyroid peroxidase antibody positivity |
Initial sample | 1,769 European ancestry cases, 16,528 European ancestry controls |
Replication sample | 922 European ancestry cases, 8,068 European ancestry controls |
Region | 20q13.2 |
Chromosome id | chr20 |
Chromosome position | 52393218 |
Reported gene | NR |
Mapped gene | LOC105376986 - LOC105372667 |
Upstream gene id | 105376986 |
Downstream gene id | 105372667 |
SNP gene ids | |
Upstream gene distance | 35663 |
Downstream gene distance | 76023 |
SNP risk allele | rs4811340-G |
SNPs | rs4811340 |
Merged | 0 |
SNP id current | 4811340 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | |
Or beta | 1.13 |
%95 Ci | [1.07-1.20] |
Platform | Affymetrix, Illumina [up to 3437411] (imputed) |
CNV | N |
Mapped trait | thyroid peroxidase antibody measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005666 |
Study accession | GCST002378 |