SNP Detail For rs4807927
1.Mapping Information
Human SNP ID rs4807927
Human chromosome chr19
Human SNP position 1423200
Pig chromosome chr2
Pig SNP position 77951060
2.Annotation Information
PubMed ID23738518
JournalGenes Brain Behav
Linkwww.ncbi.nlm.nih.gov/pubmed/23738518
StudyA genome-wide association study for reading and language abilities in two population cohorts.
Disease/TraitReading and spelling
Initial sample6,649 European ancestry children and adolescents
Replication sampleNA
Region19p13.3
Chromosome idchr19
Chromosome position1423200
Reported geneDAZAP1
Mapped geneDAZAP1
Upstream gene id
Downstream gene id
SNP gene ids26528
Upstream gene distance
Downstream gene distance
SNP risk allelers4807927-A
SNPsrs4807927
Merged0
SNP id current4807927
Contextintron_variant
Intergenic0
Allele frequency0.94
P value0.000001
Pvalue mlog6
P value text
Or beta0.207
%95 Ci[0.12-0.29] unit increase
PlatformIllumina [~ 2400000] (imputed)
CNVN
Mapped traitreading and spelling ability
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005301
Study accessionGCST002062
PubMed ID23738518
JournalGenes Brain Behav
Linkwww.ncbi.nlm.nih.gov/pubmed/23738518
StudyA genome-wide association study for reading and language abilities in two population cohorts.
Disease/TraitWord reading
Initial sample6,649 European ancestry children and adolescents
Replication sample
Region19p13.3
Chromosome idchr19
Chromosome position1423200
Reported geneDAZAP1
Mapped geneDAZAP1
Upstream gene id
Downstream gene id
SNP gene ids26528
Upstream gene distance
Downstream gene distance
SNP risk allelers4807927-A
SNPsrs4807927
Merged0
SNP id current4807927
Contextintron_variant
Intergenic0
Allele frequency0.94
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.147
%95 Ci[0.084-0.21] unit increase
PlatformIllumina [~ 2400000] (imputed)
CNVN
Mapped traitword reading
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005300
Study accessionGCST002060