Human SNP ID | rs480745 |
---|---|
Human chromosome | chr1 |
Human SNP position | 82804287 |
Pig chromosome | chr6 |
Pig SNP position | 121181313 |
PubMed ID | 25599974 |
---|---|
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/25599974 |
Study | A Genome-Wide Association Study of Early Spontaneous Preterm Delivery. |
Disease/Trait | Spontaneous preterm birth (preterm birth) |
Initial sample | 916 pre-term birth neonates, 935 term birth neonates |
Replication sample | 243 pre-term birth neonates, 149 term birth neonates |
Region | 1p31.1 |
Chromosome id | chr1 |
Chromosome position | 82804287 |
Reported gene | LPHN2 |
Mapped gene | LOC105378814 - LOC105378815 |
Upstream gene id | 105378814 |
Downstream gene id | 105378815 |
SNP gene ids | |
Upstream gene distance | 148009 |
Downstream gene distance | 9836 |
SNP risk allele | rs480745-? |
SNPs | rs480745 |
Merged | 0 |
SNP id current | 480745 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.91 |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | |
Or beta | 1.75 |
%95 Ci | [NR] |
Platform | Affymetrix [797196] |
CNV | N |
Mapped trait | birth measurement, spontaneous preterm birth |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006921, http://www.ebi.ac.uk/efo/EFO_0006917 |
Study accession | GCST002751 |