Human SNP ID | rs4803370 |
---|---|
Human chromosome | chr19 |
Human SNP position | 40812029 |
Pig chromosome | chr6 |
Pig SNP position | 44698108 |
PubMed ID | 26634245 |
---|---|
Journal | BMC Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26634245 |
Study | A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. |
Disease/Trait | Post bronchodilator FEV1 |
Initial sample | 10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals |
Replication sample | NA |
Region | 19q13.2 |
Chromosome id | chr19 |
Chromosome position | 40812029 |
Reported gene | Intergenic |
Mapped gene | CYP2T1P - CYP2F2P |
Upstream gene id | 171523 |
Downstream gene id | 171427 |
SNP gene ids | |
Upstream gene distance | 637 |
Downstream gene distance | 6448 |
SNP risk allele | rs4803370-A |
SNPs | rs4803370 |
Merged | 0 |
SNP id current | 4803370 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.978 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 0.166 |
%95 Ci | NR unit decrease |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | forced expiratory volume, response to bronchodilator |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366 |
Study accession | GCST003262 |