SNP Detail For rs4802666
1.Mapping Information
Human SNP ID rs4802666
Human chromosome chr19
Human SNP position 50217817
Pig chromosome chr6
Pig SNP position 50903877
2.Annotation Information
PubMed ID22993228
JournalAnn Rheum Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/22993228
StudyNovel genetic variants associated with lumbar disc degeneration in northern Europeans: a meta-analysis of 4600 subjects.
Disease/TraitDisc degeneration (lumbar)
Initial sample4,683 European ancestry individuals
Replication sampleNA
Region19q13.33
Chromosome idchr19
Chromosome position50217817
Reported geneMYH14
Mapped geneMYH14
Upstream gene id
Downstream gene id
SNP gene ids79784
Upstream gene distance
Downstream gene distance
SNP risk allelers4802666-A
SNPsrs4802666
Merged0
SNP id current4802666
Contextintron_variant
Intergenic0
Allele frequency0.27
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.13
%95 Ci[0.073-0.187] unit decrease
PlatformAffymetrix, Illumina [2552511] (imputed)
CNVN
Mapped traitlumbar disc degeneration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004994
Study accessionGCST001687