Human SNP ID | rs4794665 |
---|---|
Human chromosome | chr17 |
Human SNP position | 56772968 |
Pig chromosome | chr12 |
Pig SNP position | 33906433 |
PubMed ID | 18391951 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18391951 |
Study | Many sequence variants affecting diversity of adult human height. |
Disease/Trait | Height |
Initial sample | 30,968 European ancestry individuals |
Replication sample | 8,541 European ancestry individuals |
Region | 17q22 |
Chromosome id | chr17 |
Chromosome position | 56772968 |
Reported gene | COIL, RISK, NOG, DGKE, TRIM25 |
Mapped gene | NOG - C17orf67 |
Upstream gene id | 9241 |
Downstream gene id | 339210 |
SNP gene ids | |
Upstream gene distance | 177378 |
Downstream gene distance | 18945 |
SNP risk allele | rs4794665-A |
SNPs | rs4794665 |
Merged | 0 |
SNP id current | 4794665 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.48 |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | |
Or beta | 3.6 |
%95 Ci | [2.23-4.97] % s.d. increase |
Platform | Affymetrix, Illumina [up to 304226] |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000175 |
PubMed ID | 25429064 |
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25429064 |
Study | Meta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci. |
Disease/Trait | Height |
Initial sample | 36,227 East Asian ancestry individuals |
Replication sample | 57,699 East Asian ancestry individuals |
Region | 17q22 |
Chromosome id | chr17 |
Chromosome position | 56772968 |
Reported gene | C17orf67 |
Mapped gene | NOG - C17orf67 |
Upstream gene id | 9241 |
Downstream gene id | 339210 |
SNP gene ids | |
Upstream gene distance | 177378 |
Downstream gene distance | 18945 |
SNP risk allele | rs4794665-A |
SNPs | rs4794665 |
Merged | 0 |
SNP id current | 4794665 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.17 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.019 |
%95 Ci | [0.0053-0.0327] unit increase |
Platform | Affymetrix, Illumina [2704730] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST002702 |