Human SNP ID | rs4792143 |
---|---|
Human chromosome | chr17 |
Human SNP position | 11482573 |
Pig chromosome | chr12 |
Pig SNP position | 58834491 |
PubMed ID | 24262325 |
---|---|
Journal | Stroke |
Link | www.ncbi.nlm.nih.gov/pubmed/24262325 |
Study | Shared genetic susceptibility to ischemic stroke and coronary artery disease: a genome-wide analysis of common variants. |
Disease/Trait | Ischemic stroke |
Initial sample | 12,389 cases, 62,004 controls |
Replication sample | NA |
Region | 17p12 |
Chromosome id | chr17 |
Chromosome position | 11482573 |
Reported gene | FLJ45455 |
Mapped gene | SHISA6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 388336 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4792143-T |
SNPs | rs4792143 |
Merged | 0 |
SNP id current | 4792143 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 1.0989 |
%95 Ci | [1.05-1.15] |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | stroke |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000712 |
Study accession | GCST002286 |