SNP Detail For rs4792143
1.Mapping Information
Human SNP ID rs4792143
Human chromosome chr17
Human SNP position 11482573
Pig chromosome chr12
Pig SNP position 58834491
2.Annotation Information
PubMed ID24262325
JournalStroke
Linkwww.ncbi.nlm.nih.gov/pubmed/24262325
StudyShared genetic susceptibility to ischemic stroke and coronary artery disease: a genome-wide analysis of common variants.
Disease/TraitIschemic stroke
Initial sample12,389 cases, 62,004 controls
Replication sampleNA
Region17p12
Chromosome idchr17
Chromosome position11482573
Reported geneFLJ45455
Mapped geneSHISA6
Upstream gene id
Downstream gene id
SNP gene ids388336
Upstream gene distance
Downstream gene distance
SNP risk allelers4792143-T
SNPsrs4792143
Merged0
SNP id current4792143
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.0989
%95 Ci[1.05-1.15]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitstroke
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000712
Study accessionGCST002286