SNP Detail For rs4774830
1.Mapping Information
Human SNP ID rs4774830
Human chromosome chr15
Human SNP position 55824033
Pig chromosome chr1
Pig SNP position 128566277
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitDelta-5 desaturase activity
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region15q21.3
Chromosome idchr15
Chromosome position55824033
Reported geneNR
Mapped genePRTG - NEDD4
Upstream gene id283659
Downstream gene id4734
SNP gene ids
Upstream gene distance80384
Downstream gene distance2884
SNP risk allelers4774830-T
SNPsrs4774830
Merged
SNP id current4774830
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.0253
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.183
%95 Ci[0.1-0.26] unit increase
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003243