SNP Detail For rs4770403
1.Mapping Information
Human SNP ID rs4770403
Human chromosome chr13
Human SNP position 23180988
Pig chromosome chr11
Pig SNP position 1519542
2.Annotation Information
PubMed ID22004471
JournalAddict Biol
Linkwww.ncbi.nlm.nih.gov/pubmed/22004471
StudyGenome-wide significant association between alcohol dependence and a variant in the ADH gene cluster.
Disease/TraitAlcohol dependence
Initial sample1,333 European ancestry male cases, 2,168 European ancestry male controls
Replication sampleNA
Region13q12.12
Chromosome idchr13
Chromosome position23180988
Reported geneNR
Mapped geneSGCG
Upstream gene id
Downstream gene id
SNP gene ids6445
Upstream gene distance
Downstream gene distance
SNP risk allelers4770403-?
SNPsrs4770403
Merged0
SNP id current4770403
Context5_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.33
%95 Ci[1.17-1.50]
PlatformIllumina [463044]
CNVN
Mapped traitalcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST001281