Human SNP ID | rs4770403 |
---|---|
Human chromosome | chr13 |
Human SNP position | 23180988 |
Pig chromosome | chr11 |
Pig SNP position | 1519542 |
PubMed ID | 22004471 |
---|---|
Journal | Addict Biol |
Link | www.ncbi.nlm.nih.gov/pubmed/22004471 |
Study | Genome-wide significant association between alcohol dependence and a variant in the ADH gene cluster. |
Disease/Trait | Alcohol dependence |
Initial sample | 1,333 European ancestry male cases, 2,168 European ancestry male controls |
Replication sample | NA |
Region | 13q12.12 |
Chromosome id | chr13 |
Chromosome position | 23180988 |
Reported gene | NR |
Mapped gene | SGCG |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6445 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4770403-? |
SNPs | rs4770403 |
Merged | 0 |
SNP id current | 4770403 |
Context | 5_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.33 |
%95 Ci | [1.17-1.50] |
Platform | Illumina [463044] |
CNV | N |
Mapped trait | alcohol dependence |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003829 |
Study accession | GCST001281 |