SNP Detail For rs4765623
1.Mapping Information
Human SNP ID rs4765623
Human chromosome chr12
Human SNP position 124836304
Pig chromosome chr14
Pig SNP position 29992598
2.Annotation Information
PubMed ID21131975
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21131975
StudyGenome-wide association study of renal cell carcinoma identifies two susceptibility loci on 2p21 and 11q13.3.
Disease/TraitRenal cell carcinoma
Initial sample3,772 European ancestry cases, 8,505 European ancestry controls
Replication sample2,198 European ancestry cases, 4,918 European ancestry controls
Region12q24.31
Chromosome idchr12
Chromosome position124836304
Reported geneSCARB1
Mapped geneSCARB1
Upstream gene id
Downstream gene id
SNP gene ids949
Upstream gene distance
Downstream gene distance
SNP risk allelers4765623-?
SNPsrs4765623
Merged0
SNP id current4765623
Contextintron_variant
Intergenic0
Allele frequency0.34
P value0.00000003
Pvalue mlog7.52287874528033
P value text
Or beta1.15
%95 Ci[1.09-1.20]
PlatformIllumina [586069]
CNVN
Mapped traitrenal cell carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000681
Study accessionGCST000907