Human SNP ID | rs4764124 |
---|---|
Human chromosome | chr12 |
Human SNP position | 14813670 |
Pig chromosome | chr5 |
Pig SNP position | 61130137 |
PubMed ID | 23449627 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23449627 |
Study | Genome-wide association and longitudinal analyses reveal genetic loci linking pubertal height growth, pubertal timing and childhood adiposity. |
Disease/Trait | Pubertal anthropometrics |
Initial sample | 7,161 European ancestry males, 6,879 European ancestry females |
Replication sample | 5,133 European ancestry males, 4,577 European ancestry females |
Region | 12p12.3 |
Chromosome id | chr12 |
Chromosome position | 14813670 |
Reported gene | C12orf60, HIST4H4 |
Mapped gene | SMCO3, C12orf60 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 440087, 144608 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4764124-C |
SNPs | rs4764124 |
Merged | 0 |
SNP id current | 4764124 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.52 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | (Single Height) |
Or beta | 0.05 |
%95 Ci | [0.03-0.07] unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST001875 |