Human SNP ID | rs4762767 |
---|---|
Human chromosome | chr12 |
Human SNP position | 19713195 |
Pig chromosome | chr5 |
Pig SNP position | 56701697 |
PubMed ID | 21946350 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21946350 |
Study | Genome-wide association and large-scale follow up identifies 16 new loci influencing lung function. |
Disease/Trait | Pulmonary function |
Initial sample | 48,201 European ancestry individuals |
Replication sample | 46,411 European ancestry individuals |
Region | 12p12.3 |
Chromosome id | chr12 |
Chromosome position | 19713195 |
Reported gene | AEBP2 |
Mapped gene | LOC101928387 - LOC105369682 |
Upstream gene id | 101928387 |
Downstream gene id | 105369682 |
SNP gene ids | |
Upstream gene distance | 40106 |
Downstream gene distance | 130552 |
SNP risk allele | rs4762767-G |
SNPs | rs4762767 |
Merged | 0 |
SNP id current | 4762767 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (FEV1/FVC) |
Or beta | 0.027 |
%95 Ci | [0.015-0.039] unit decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | pulmonary function measurement, FEV/FEC ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003892, http://www.ebi.ac.uk/efo/EFO_0004713 |
Study accession | GCST001248 |