Human SNP ID | rs476141 |
---|---|
Human chromosome | chr1 |
Human SNP position | 244013122 |
Pig chromosome | chr10 |
Pig SNP position | 19317012 |
PubMed ID | 21441570 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21441570 |
Study | Genome-wide meta-analysis for severe diabetic retinopathy. |
Disease/Trait | Diabetic retinopathy |
Initial sample | 973 European ancestry cases, 1,856 European ancestry controls |
Replication sample | NA |
Region | 1q44 |
Chromosome id | chr1 |
Chromosome position | 244013122 |
Reported gene | AKT3, ZNF238 |
Mapped gene | LOC339529 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 339529 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs476141-A |
SNPs | rs476141 |
Merged | 0 |
SNP id current | 476141 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.51 |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | |
Or beta | 1.37 |
%95 Ci | [NR] |
Platform | Affymetrix, Illumina [2543887] (imputed) |
CNV | N |
Mapped trait | diabetic retinopathy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003770 |
Study accession | GCST001017 |