Human SNP ID | rs4757391 |
---|---|
Human chromosome | chr11 |
Human SNP position | 16281393 |
Pig chromosome | chr2 |
Pig SNP position | 45877053 |
PubMed ID | 25249183 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25249183 |
Study | Genome-wide association study in Chinese identifies novel loci for blood pressure and hypertension. |
Disease/Trait | Systolic blood pressure |
Initial sample | 11,816 Han Chinese ancestry individuals |
Replication sample | 69,146 Han Chinese ancestry individuals |
Region | 11p15.2 |
Chromosome id | chr11 |
Chromosome position | 16281393 |
Reported gene | SOX6 |
Mapped gene | SOX6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55553 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4757391-C |
SNPs | rs4757391 |
Merged | 0 |
SNP id current | 4757391 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.28 |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | |
Or beta | 0.88 |
%95 Ci | [0.59-1.17] unit increase |
Platform | Affymetrix, Illumina [2485448] (imputed) |
CNV | N |
Mapped trait | systolic blood pressure |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006335 |
Study accession | GCST002630 |
PubMed ID | 25249183 |
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25249183 |
Study | Genome-wide association study in Chinese identifies novel loci for blood pressure and hypertension. |
Disease/Trait | Diastolic blood pressure |
Initial sample | 11,816 Han Chinese ancestry individuals |
Replication sample | 69,146 Han Chinese ancestry individuals |
Region | 11p15.2 |
Chromosome id | chr11 |
Chromosome position | 16281393 |
Reported gene | SOX6 |
Mapped gene | SOX6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55553 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4757391-C |
SNPs | rs4757391 |
Merged | 0 |
SNP id current | 4757391 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.28 |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | |
Or beta | 0.49 |
%95 Ci | [0.31-0.67] unit increase |
Platform | Affymetrix, Illumina [2485448] (imputed) |
CNV | N |
Mapped trait | diastolic blood pressure |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006336 |
Study accession | GCST002631 |
PubMed ID | 25249183 |
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25249183 |
Study | Genome-wide association study in Chinese identifies novel loci for blood pressure and hypertension. |
Disease/Trait | Hypertension |
Initial sample | 5,065 Han Chinese ancestry cases, 4,404 Han Chinese ancestry controls |
Replication sample | 29,799 Han Chinese ancestry cases, 39,347 Han Chinese ancestry controls |
Region | 11p15.2 |
Chromosome id | chr11 |
Chromosome position | 16281393 |
Reported gene | SOX6 |
Mapped gene | SOX6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55553 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4757391-C |
SNPs | rs4757391 |
Merged | 0 |
SNP id current | 4757391 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.28 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [2485448] (imputed) |
CNV | N |
Mapped trait | hypertension |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000537 |
Study accession | GCST002627 |