Human SNP ID | rs4757144 |
---|---|
Human chromosome | chr11 |
Human SNP position | 13309679 |
Pig chromosome | chr2 |
Pig SNP position | 49414474 |
PubMed ID | 23358160 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/23358160 |
Study | Genome-wide study of association and interaction with maternal cytomegalovirus infection suggests new schizophrenia loci. |
Disease/Trait | Schizophrenia |
Initial sample | 888 European ancestry cases, 882 European ancestry controls |
Replication sample | 2539 European ancestry cases, 5486 European ancestry controls |
Region | 11p15.3 |
Chromosome id | chr11 |
Chromosome position | 13309679 |
Reported gene | ARNTL |
Mapped gene | ARNTL |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 406 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4757144-G |
SNPs | rs4757144 |
Merged | 0 |
SNP id current | 4757144 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.418 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 1.154 |
%95 Ci | |
Platform | Illumina [541148] |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST001839 |