Human SNP ID | rs4749884 |
---|---|
Human chromosome | chr10 |
Human SNP position | 9602837 |
Pig chromosome | chr10 |
Pig SNP position | 68262978 |
PubMed ID | 26443449 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/26443449 |
Study | Large-scale association analysis in Asians identifies new susceptibility loci for prostate cancer. |
Disease/Trait | Prostate cancer |
Initial sample | 3,000 East Asian ancestry cases, 4,394 East Asian ancestry controls |
Replication sample | 3,605 East Asian ancestry cases, 3,919 East Asian ancestry controls |
Region | 10p14 |
Chromosome id | chr10 |
Chromosome position | 9602837 |
Reported gene | intergenic |
Mapped gene | LOC105376402 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105376402 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4749884-C |
SNPs | rs4749884 |
Merged | |
SNP id current | 4749884 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.533 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 1.12 |
%95 Ci | [NR] |
Platform | Illumina [4550396] (imputed) |
CNV | N |
Mapped trait | prostate carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001663 |
Study accession | GCST003148 |