SNP Detail For rs4748153
1.Mapping Information
Human SNP ID rs4748153
Human chromosome chr10
Human SNP position 6564579
Pig chromosome chr10
Pig SNP position 70522774
2.Annotation Information
PubMed ID22542470
JournalVaccine
Linkwww.ncbi.nlm.nih.gov/pubmed/22542470
StudyGenome-wide association study of antibody response to smallpox vaccine.
Disease/TraitImmune response to smallpox vaccine (IL-6)
Initial sample217 African American individuals, 580 European ancestry individuals, 217 Hispanic individuals
Replication sampleNA
Region10p15.1
Chromosome idchr10
Chromosome position6564579
Reported genePRKCQ
Mapped genePRKCQ
Upstream gene id
Downstream gene id
SNP gene ids5588
Upstream gene distance
Downstream gene distance
SNP risk allelers4748153-?
SNPsrs4748153
Merged0
SNP id current4748153
Contextintron_variant
Intergenic0
Allele frequency
P value0.00000003
Pvalue mlog7.52287874528033
P value text(Hispanic)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645
Study accessionGCST001491