SNP Detail For rs4747011
1.Mapping Information
Human SNP ID rs4747011
Human chromosome chr10
Human SNP position 70354622
Pig chromosome chr14
Pig SNP position 79192078
2.Annotation Information
PubMed ID23471985
JournalProc Natl Acad Sci U S A
Linkwww.ncbi.nlm.nih.gov/pubmed/23471985
StudyGenome-wide scan of healthy human connectome discovers SPON1 gene variant influencing dementia severity.
Disease/TraitBrain connectivity
Initial sample331 European ancestry individuals
Replication sample
Region10q22.1
Chromosome idchr10
Chromosome position70354622
Reported geneLRRC20
Mapped geneLRRC20
Upstream gene id
Downstream gene id
SNP gene ids55222
Upstream gene distance
Downstream gene distance
SNP risk allelers4747011-?
SNPsrs4747011
Merged0
SNP id current4747011
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000000009
Pvalue mlog9.04575749056067
P value text(Strength - L-transverse temporal)
Or beta
%95 Ci
PlatformIllumina [428287]
CNVN
Mapped traitbrain connectivity measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005210
Study accessionGCST001889