Human SNP ID | rs4747011 |
---|---|
Human chromosome | chr10 |
Human SNP position | 70354622 |
Pig chromosome | chr14 |
Pig SNP position | 79192078 |
PubMed ID | 23471985 |
---|---|
Journal | Proc Natl Acad Sci U S A |
Link | www.ncbi.nlm.nih.gov/pubmed/23471985 |
Study | Genome-wide scan of healthy human connectome discovers SPON1 gene variant influencing dementia severity. |
Disease/Trait | Brain connectivity |
Initial sample | 331 European ancestry individuals |
Replication sample | |
Region | 10q22.1 |
Chromosome id | chr10 |
Chromosome position | 70354622 |
Reported gene | LRRC20 |
Mapped gene | LRRC20 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55222 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4747011-? |
SNPs | rs4747011 |
Merged | 0 |
SNP id current | 4747011 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000000009 |
Pvalue mlog | 9.04575749056067 |
P value text | (Strength - L-transverse temporal) |
Or beta | |
%95 Ci | |
Platform | Illumina [428287] |
CNV | N |
Mapped trait | brain connectivity measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005210 |
Study accession | GCST001889 |