Human SNP ID | rs4746822 |
---|---|
Human chromosome | chr10 |
Human SNP position | 69223185 |
Pig chromosome | chr14 |
Pig SNP position | 78305032 |
PubMed ID | 23903356 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/23903356 |
Study | Identification of HKDC1 and BACE2 as genes influencing glycemic traits during pregnancy through genome-wide association studies. |
Disease/Trait | Glycemic traits (pregnancy) |
Initial sample | 1,367 European ancestry individuals, 817 Hispanic individuals, 1,075 Afro-Caribbean individuals, 1,178 Thai ancestry individuals |
Replication sample | 2,798 European ancestry individuals, 228 French Canadian founder population individuals |
Region | 10q22.1 |
Chromosome id | chr10 |
Chromosome position | 69223185 |
Reported gene | SUPV3L1, SRGN, HK1, VPS26A, HKDC1 |
Mapped gene | HKDC1, LOC101928994 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 80201, 101928994 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4746822-T |
SNPs | rs4746822 |
Merged | 0 |
SNP id current | 4746822 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.675 |
P value | 1E-22 |
Pvalue mlog | 22 |
P value text | (2HPG) |
Or beta | 0.28 |
%95 Ci | [NR] unit increase |
Platform | Illumina [up to 945994] (imputed) |
CNV | N |
Mapped trait | glucose tolerance test |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004307 |
Study accession | GCST002110 |