SNP Detail For rs4734806
1.Mapping Information
Human SNP ID rs4734806
Human chromosome chr8
Human SNP position 104688452
Pig chromosome chr4
Pig SNP position 35357373
2.Annotation Information
PubMed ID24024966
JournalJ Clin Periodontol
Linkwww.ncbi.nlm.nih.gov/pubmed/24024966
StudyGenome-wide association study of chronic periodontitis in a general German population.
Disease/TraitPeriodontitis (DPAL)
Initial sampleup to 2,501 European ancestry individuals
Replication sampleNA
Region8q22.3
Chromosome idchr8
Chromosome position104688452
Reported geneLRP12
Mapped geneLRP12 - LOC105375694
Upstream gene id29967
Downstream gene id105375694
SNP gene ids
Upstream gene distance99428
Downstream gene distance138931
SNP risk allelers4734806-G
SNPsrs4734806
Merged0
SNP id current4734806
Contextintron_variant
Intergenic1
Allele frequency0.16
P value0.000006
Pvalue mlog5.22184874961635
P value text(Age 20-60 years)
Or beta0.2075
%95 Ci[0.12-0.30] unit decrease
PlatformAffymetrix, Illumina [up to 17585496] (imputed)
CNVN
Mapped traitperiodontitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000649
Study accessionGCST002129