Human SNP ID | rs4734806 |
---|---|
Human chromosome | chr8 |
Human SNP position | 104688452 |
Pig chromosome | chr4 |
Pig SNP position | 35357373 |
PubMed ID | 24024966 |
---|---|
Journal | J Clin Periodontol |
Link | www.ncbi.nlm.nih.gov/pubmed/24024966 |
Study | Genome-wide association study of chronic periodontitis in a general German population. |
Disease/Trait | Periodontitis (DPAL) |
Initial sample | up to 2,501 European ancestry individuals |
Replication sample | NA |
Region | 8q22.3 |
Chromosome id | chr8 |
Chromosome position | 104688452 |
Reported gene | LRP12 |
Mapped gene | LRP12 - LOC105375694 |
Upstream gene id | 29967 |
Downstream gene id | 105375694 |
SNP gene ids | |
Upstream gene distance | 99428 |
Downstream gene distance | 138931 |
SNP risk allele | rs4734806-G |
SNPs | rs4734806 |
Merged | 0 |
SNP id current | 4734806 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.16 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Age 20-60 years) |
Or beta | 0.2075 |
%95 Ci | [0.12-0.30] unit decrease |
Platform | Affymetrix, Illumina [up to 17585496] (imputed) |
CNV | N |
Mapped trait | periodontitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000649 |
Study accession | GCST002129 |