Human SNP ID | rs4731120 |
---|---|
Human chromosome | chr7 |
Human SNP position | 123771169 |
Pig chromosome | chr18 |
Pig SNP position | 25297581 |
PubMed ID | 22139419 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/22139419 |
Study | New gene functions in megakaryopoiesis and platelet formation. |
Disease/Trait | Platelet count |
Initial sample | 47,005 European ancestry individuals, 1,661 Val Borbera individuals |
Replication sample | Up to 18,838 European ancestry individuals |
Region | 7q31.32 |
Chromosome id | chr7 |
Chromosome position | 123771169 |
Reported gene | WASL |
Mapped gene | WASL - HYALP1 |
Upstream gene id | 8976 |
Downstream gene id | 26062 |
SNP gene ids | |
Upstream gene distance | 22098 |
Downstream gene distance | 42970 |
SNP risk allele | rs4731120-C |
SNPs | rs4731120 |
Merged | 0 |
SNP id current | 4731120 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000000000003 |
Pvalue mlog | 11.5228787452803 |
P value text | |
Or beta | 4.14 |
%95 Ci | [2.98-5.3] 10^9/l increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | platelet count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004309 |
Study accession | GCST001337 |