SNP Detail For rs4727338
1.Mapping Information
Human SNP ID rs4727338
Human chromosome chr7
Human SNP position 96491363
Pig chromosome chr9
Pig SNP position 83776545
2.Annotation Information
PubMed ID22504420
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22504420
StudyGenome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture.
Disease/TraitBone mineral density
Initial sampleUp to 32,961 European and East Asian ancestry individuals
Replication sampleUp to 50,933 European and East Asian ancestry individuals
Region7q21.3
Chromosome idchr7
Chromosome position96491363
Reported geneSLC25A13
Mapped geneLOC105375411, C7orf76
Upstream gene id
Downstream gene id
SNP gene ids105375411, 401388
Upstream gene distance
Downstream gene distance
SNP risk allelers4727338-C
SNPsrs4727338
Merged0
SNP id current4727338
Contextintron_variant
Intergenic0
Allele frequency0.67
P value8E-48
Pvalue mlog47.096910013008
P value text(FNBMD)
Or beta0.08
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitbone density
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003923
Study accessionGCST001482