Human SNP ID | rs4724100 |
---|---|
Human chromosome | chr7 |
Human SNP position | 42225080 |
Pig chromosome | chr18 |
Pig SNP position | 57434788 |
PubMed ID | 22036096 |
---|---|
Journal | J Allergy Clin Immunol |
Link | www.ncbi.nlm.nih.gov/pubmed/22036096 |
Study | A genome-wide meta-analysis of genetic variants associated with allergic rhinitis and grass sensitization and their interaction with birth order. |
Disease/Trait | Allergic rhinitis |
Initial sample | 3,933 European ancestry cases, 8,965 European ancestry controls |
Replication sample | NA |
Region | 7p14.1 |
Chromosome id | chr7 |
Chromosome position | 42225080 |
Reported gene | GLI3 |
Mapped gene | GLI3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2737 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4724100-C |
SNPs | rs4724100 |
Merged | 0 |
SNP id current | 4724100 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.45 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.14 |
%95 Ci | [1.08-1.21] |
Platform | Affymetrix, Illumina [2217510] (imputed) |
CNV | N |
Mapped trait | seasonal allergic rhinitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003956 |
Study accession | GCST001310 |