SNP Detail For rs4724100
1.Mapping Information
Human SNP ID rs4724100
Human chromosome chr7
Human SNP position 42225080
Pig chromosome chr18
Pig SNP position 57434788
2.Annotation Information
PubMed ID22036096
JournalJ Allergy Clin Immunol
Linkwww.ncbi.nlm.nih.gov/pubmed/22036096
StudyA genome-wide meta-analysis of genetic variants associated with allergic rhinitis and grass sensitization and their interaction with birth order.
Disease/TraitAllergic rhinitis
Initial sample3,933 European ancestry cases, 8,965 European ancestry controls
Replication sampleNA
Region7p14.1
Chromosome idchr7
Chromosome position42225080
Reported geneGLI3
Mapped geneGLI3
Upstream gene id
Downstream gene id
SNP gene ids2737
Upstream gene distance
Downstream gene distance
SNP risk allelers4724100-C
SNPsrs4724100
Merged0
SNP id current4724100
Contextintron_variant
Intergenic0
Allele frequency0.45
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.14
%95 Ci[1.08-1.21]
PlatformAffymetrix, Illumina [2217510] (imputed)
CNVN
Mapped traitseasonal allergic rhinitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003956
Study accessionGCST001310