Human SNP ID | rs4723619 |
---|---|
Human chromosome | chr7 |
Human SNP position | 37226747 |
Pig chromosome | chr18 |
Pig SNP position | 40643420 |
PubMed ID | 19176441 |
---|---|
Journal | JAMA |
Link | www.ncbi.nlm.nih.gov/pubmed/19176441 |
Study | Genome-wide interrogation of germline genetic variation associated with treatment response in childhood acute lymphoblastic leukemia. |
Disease/Trait | Response to treatment for acute lymphoblastic leukemia |
Initial sample | 356 European ancestry cases, 53 Black cases, 78 cases |
Replication sample | NA |
Region | 7p14.1 |
Chromosome id | chr7 |
Chromosome position | 37226747 |
Reported gene | ELMO1 |
Mapped gene | ELMO1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9844 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4723619-C |
SNPs | rs4723619 |
Merged | 0 |
SNP id current | 4723619 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 3.01 |
%95 Ci | [1.50-6.03] |
Platform | Affymetrix [476796] |
CNV | N |
Mapped trait | acute lymphoblastic leukemia, response to antineoplastic agent |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000220, http://purl.obolibrary.org/obo/GO_0097327 |
Study accession | GCST000323 |