SNP Detail For rs4721295
1.Mapping Information
Human SNP ID rs4721295
Human chromosome chr7
Human SNP position 1997034
Pig chromosome chr3
Pig SNP position 1631709
2.Annotation Information
PubMed ID24166486
JournalSci Rep
Linkwww.ncbi.nlm.nih.gov/pubmed/24166486
StudyGWAS meta analysis identifies TSNARE1 as a novel Schizophrenia / Bipolar susceptibility locus.
Disease/TraitSchizophrenia, schizoaffective disorder or bipolar disorder
Initial sample11,985 European, African American, Asian, other and unknown ancestry schizophrenia cases, 377 European, African American, Asian, other and unknown ancestry schizoaffective disorder cases, 1,032 bipolar disorder cases, 34,676 European, African American, As
Replication sample2652 individuals
Region7p22.3
Chromosome idchr7
Chromosome position1997034
Reported geneMAD1L1
Mapped geneMAD1L1
Upstream gene id
Downstream gene id
SNP gene ids8379
Upstream gene distance
Downstream gene distance
SNP risk allelers4721295-?
SNPsrs4721295
Merged0
SNP id current4721295
Contextintron_variant
Intergenic0
Allele frequency0.378
P value0.0000000006
Pvalue mlog9.22184874961635
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitschizophrenia, bipolar disorder, schizoaffective disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692, http://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0005411
Study accessionGCST002254