Human SNP ID | rs4721295 |
---|---|
Human chromosome | chr7 |
Human SNP position | 1997034 |
Pig chromosome | chr3 |
Pig SNP position | 1631709 |
PubMed ID | 24166486 |
---|---|
Journal | Sci Rep |
Link | www.ncbi.nlm.nih.gov/pubmed/24166486 |
Study | GWAS meta analysis identifies TSNARE1 as a novel Schizophrenia / Bipolar susceptibility locus. |
Disease/Trait | Schizophrenia, schizoaffective disorder or bipolar disorder |
Initial sample | 11,985 European, African American, Asian, other and unknown ancestry schizophrenia cases, 377 European, African American, Asian, other and unknown ancestry schizoaffective disorder cases, 1,032 bipolar disorder cases, 34,676 European, African American, As |
Replication sample | 2652 individuals |
Region | 7p22.3 |
Chromosome id | chr7 |
Chromosome position | 1997034 |
Reported gene | MAD1L1 |
Mapped gene | MAD1L1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 8379 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4721295-? |
SNPs | rs4721295 |
Merged | 0 |
SNP id current | 4721295 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.378 |
P value | 0.0000000006 |
Pvalue mlog | 9.22184874961635 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | schizophrenia, bipolar disorder, schizoaffective disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692, http://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0005411 |
Study accession | GCST002254 |