SNP Detail For rs4715555
1.Mapping Information
Human SNP ID rs4715555
Human chromosome chr6
Human SNP position 55583812
Pig chromosome chr7
Pig SNP position 30062705
2.Annotation Information
PubMed ID23509962
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23509962
StudyA genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
Disease/TraitVenous thromboembolism (SNP x SNP interaction)
Initial sample411 European ancestry cases, 1,228 European ancestry controls
Replication sample1,542 European ancestry cases, 1,110 European ancestry controls
Region1p31.3 x 6p12.1
Chromosome idchr1 x 6
Chromosome position65230247 x 55583812
Reported geneNR x NR
Mapped geneAK4 x HMGCLL1
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers1336472-A x rs4715555-G
SNPsrs1336472 x rs4715555
Merged0
SNP id current
Context3_prime_UTR_variant x upstream_gene_variant
Intergenic
Allele frequency
P value0.0000000004
Pvalue mlog9.39794000867203
P value text
Or beta1.54
%95 Ci[NR]
PlatformIllumina [291872]
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST001913