Human SNP ID | rs4712524 |
---|---|
Human chromosome | chr6 |
Human SNP position | 20657634 |
Pig chromosome | chr7 |
Pig SNP position | 16929599 |
PubMed ID | 18711366 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18711366 |
Study | SNPs in KCNQ1 are associated with susceptibility to type 2 diabetes in East Asian and European populations. |
Disease/Trait | Type 2 diabetes |
Initial sample | 194 Japanese ancestry cases, 1,558 Japanese ancestry controls |
Replication sample | 5,324 East Asian ancestry cases, 7,037 East Asian ancestry controls, 4,085 European ancestry cases, 5,302 European ancestry controls |
Region | 6p22.3 |
Chromosome id | chr6 |
Chromosome position | 20657634 |
Reported gene | CDKAL1 |
Mapped gene | CDKAL1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54901 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4712524-G |
SNPs | rs4712524 |
Merged | 0 |
SNP id current | 4712524 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.42 |
P value | 0.0000000003 |
Pvalue mlog | 9.52287874528033 |
P value text | |
Or beta | 1.22 |
%95 Ci | [1.15-1.31] |
Platform | Affymetrix [207097] |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST000221 |