SNP Detail For rs4707930
1.Mapping Information
Human SNP ID rs4707930
Human chromosome chr6
Human SNP position 71696616
Pig chromosome chr1
Pig SNP position 57986565
2.Annotation Information
PubMed ID20014019
JournalInflamm Bowel Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/20014019
StudyGenome wide association (GWA) predictors of anti-TNFalpha therapeutic responsiveness in pediatric inflammatory bowel disease.
Disease/TraitResponse to anti-TNF alpha therapy in inflammatory bowel disease
Initial sample94 pediatric cases
Replication sampleNA
Region6q13
Chromosome idchr6
Chromosome position71696616
Reported geneintergenic
Mapped geneKRT19P1 - RIMS1
Upstream gene id441160
Downstream gene id22999
SNP gene ids
Upstream gene distance110583
Downstream gene distance190087
SNP risk allelers4707930-?
SNPsrs4707930
Merged0
SNP id current4707930
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta6.603
%95 Ci[NR]
PlatformIllumina [301742]
CNVN
Mapped traitresponse to TNF antagonist
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004653
Study accessionGCST000748