Human SNP ID | rs4707930 |
---|---|
Human chromosome | chr6 |
Human SNP position | 71696616 |
Pig chromosome | chr1 |
Pig SNP position | 57986565 |
PubMed ID | 20014019 |
---|---|
Journal | Inflamm Bowel Dis |
Link | www.ncbi.nlm.nih.gov/pubmed/20014019 |
Study | Genome wide association (GWA) predictors of anti-TNFalpha therapeutic responsiveness in pediatric inflammatory bowel disease. |
Disease/Trait | Response to anti-TNF alpha therapy in inflammatory bowel disease |
Initial sample | 94 pediatric cases |
Replication sample | NA |
Region | 6q13 |
Chromosome id | chr6 |
Chromosome position | 71696616 |
Reported gene | intergenic |
Mapped gene | KRT19P1 - RIMS1 |
Upstream gene id | 441160 |
Downstream gene id | 22999 |
SNP gene ids | |
Upstream gene distance | 110583 |
Downstream gene distance | 190087 |
SNP risk allele | rs4707930-? |
SNPs | rs4707930 |
Merged | 0 |
SNP id current | 4707930 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 6.603 |
%95 Ci | [NR] |
Platform | Illumina [301742] |
CNV | N |
Mapped trait | response to TNF antagonist |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004653 |
Study accession | GCST000748 |