SNP Detail For rs4705952
1.Mapping Information
Human SNP ID rs4705952
Human chromosome chr5
Human SNP position 132503926
Pig chromosome chr2
Pig SNP position 140265723
2.Annotation Information
PubMed ID21300955
JournalCirculation
Linkwww.ncbi.nlm.nih.gov/pubmed/21300955
StudyMeta-analysis of genome-wide association studies in >80 000 subjects identifies multiple loci for C-reactive protein levels.
Disease/TraitC-reactive protein levels
Initial sample63,678 European ancestry individuals 1,792 Erasmus Ruchpen individuals, 715 Orcadian individuals
Replication sample16,540 European ancestry individuals
Region5q31.1
Chromosome idchr5
Chromosome position132503926
Reported geneIRF1
Mapped geneLOC105379200 - IL5
Upstream gene id105379200
Downstream gene id3567
SNP gene ids
Upstream gene distance6673
Downstream gene distance37518
SNP risk allelers4705952-G
SNPsrs4705952
Merged0
SNP id current4705952
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000001
Pvalue mlog8
P value text
Or beta0.042
%95 Ci[0.03-0.05] unit increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitC-reactive protein measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004458
Study accessionGCST000965