Human SNP ID | rs4705952 |
---|---|
Human chromosome | chr5 |
Human SNP position | 132503926 |
Pig chromosome | chr2 |
Pig SNP position | 140265723 |
PubMed ID | 21300955 |
---|---|
Journal | Circulation |
Link | www.ncbi.nlm.nih.gov/pubmed/21300955 |
Study | Meta-analysis of genome-wide association studies in >80 000 subjects identifies multiple loci for C-reactive protein levels. |
Disease/Trait | C-reactive protein levels |
Initial sample | 63,678 European ancestry individuals 1,792 Erasmus Ruchpen individuals, 715 Orcadian individuals |
Replication sample | 16,540 European ancestry individuals |
Region | 5q31.1 |
Chromosome id | chr5 |
Chromosome position | 132503926 |
Reported gene | IRF1 |
Mapped gene | LOC105379200 - IL5 |
Upstream gene id | 105379200 |
Downstream gene id | 3567 |
SNP gene ids | |
Upstream gene distance | 6673 |
Downstream gene distance | 37518 |
SNP risk allele | rs4705952-G |
SNPs | rs4705952 |
Merged | 0 |
SNP id current | 4705952 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | 0.042 |
%95 Ci | [0.03-0.05] unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | C-reactive protein measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004458 |
Study accession | GCST000965 |